Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COL17A1Collagen type XVII alpha 1 chain. (1455 aa)    
Predicted Functional Partners:
ITGB4
Integrin beta.
   
 0.892
DST
Dystonin.
   
 0.868
LAMA3
Laminin subunit alpha 3.
   
 0.833
LAMB3
Laminin subunit beta 3.
   
 0.739
LAMC2
Laminin subunit gamma 2.
   
 0.739
MACF1
Microtubule actin crosslinking factor 1.
   
 0.723
PLEC
Plectin.
   
 0.718
LAMA4
Laminin subunit alpha 4.
   
 0.677
MMP20
Uncharacterized protein.
   
 0.671
XPR1
Xenotropic and polytropic retrovirus receptor 1 isoform 1.
      
 0.654
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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