Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
F6SPM3_MACMUUncharacterized protein. (173 aa)    
Predicted Functional Partners:
MRPL40
39S ribosomal protein L40, mitochondrial.
   
   0.858
MRPL4
Mitochondrial ribosomal protein L4.
   
   0.835
MRPL44
Mitochondrial ribosomal protein L44.
   
 
 0.829
MRPL38
Mitochondrial ribosomal protein L38.
   
 
 0.803
MRPL20
Uncharacterized protein.
   
   0.798
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
   
  0.796
MRPL13
39S ribosomal protein L13, mitochondrial; Belongs to the universal ribosomal protein uL13 family.
   
   0.795
MRPL52
Uncharacterized protein.
   
   0.789
MRPL51
Uncharacterized protein.
   
 
 0.783
MRPL17
39S ribosomal protein L17, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.782
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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