SND1 protein (Macaca mulatta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Macaca mulatta

NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKAP4	SND1	ENSMMUP00000030361	ENSMMUP00000020240	A-kinase anchoring protein 4.	Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.	0.714
DDX6	DHX9	ENSMMUP00000068224	ENSMMUP00000007450	Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	ATP-dependent RNA helicase A.	0.749
DDX6	HDLBP	ENSMMUP00000068224	ENSMMUP00000006293	Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	High density lipoprotein binding protein.	0.700
DDX6	RPS3	ENSMMUP00000068224	ENSMMUP00000036826	Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.671
DDX6	SERBP1	ENSMMUP00000068224	ENSMMUP00000046439	Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	HABP4_PAI-RBP1 domain-containing protein.	0.624
DDX6	SND1	ENSMMUP00000068224	ENSMMUP00000020240	Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.	0.716
DHX9	DDX6	ENSMMUP00000007450	ENSMMUP00000068224	ATP-dependent RNA helicase A.	Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	0.749
DHX9	HDLBP	ENSMMUP00000007450	ENSMMUP00000006293	ATP-dependent RNA helicase A.	High density lipoprotein binding protein.	0.576
DHX9	LRRC59	ENSMMUP00000007450	ENSMMUP00000049294	ATP-dependent RNA helicase A.	Leucine-rich repeat-containing protein 59.	0.557
DHX9	RPS9	ENSMMUP00000007450	ENSMMUP00000061139	ATP-dependent RNA helicase A.	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.	0.427
DHX9	SND1	ENSMMUP00000007450	ENSMMUP00000020240	ATP-dependent RNA helicase A.	Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.	0.782
HDLBP	DDX6	ENSMMUP00000006293	ENSMMUP00000068224	High density lipoprotein binding protein.	Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	0.700
HDLBP	DHX9	ENSMMUP00000006293	ENSMMUP00000007450	High density lipoprotein binding protein.	ATP-dependent RNA helicase A.	0.576
HDLBP	RPS3	ENSMMUP00000006293	ENSMMUP00000036826	High density lipoprotein binding protein.	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.671
HDLBP	SND1	ENSMMUP00000006293	ENSMMUP00000020240	High density lipoprotein binding protein.	Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.	0.763
LRRC59	DHX9	ENSMMUP00000049294	ENSMMUP00000007450	Leucine-rich repeat-containing protein 59.	ATP-dependent RNA helicase A.	0.557
LRRC59	MTDH	ENSMMUP00000049294	ENSMMUP00000046210	Leucine-rich repeat-containing protein 59.	Metadherin.	0.443
LRRC59	SND1	ENSMMUP00000049294	ENSMMUP00000020240	Leucine-rich repeat-containing protein 59.	Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.	0.844
MTDH	LRRC59	ENSMMUP00000046210	ENSMMUP00000049294	Metadherin.	Leucine-rich repeat-containing protein 59.	0.443
MTDH	SND1	ENSMMUP00000046210	ENSMMUP00000020240	Metadherin.	Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.	0.854