STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPS27A-2Ubiquitin-40S ribosomal protein S27a. (156 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
0.999
UBA52
Ubiquitin-60S ribosomal protein L40.
  
0.998
UBE2V1
TMEM189_B_dmain domain-containing protein.
   
 0.996
UBC
Uncharacterized protein.
  
0.993
UBB
Uncharacterized protein.
  
0.993
RPS28
40S ribosomal protein S28.
   
 0.983
NBR1
NBR1 autophagy cargo receptor.
   
 0.978
RPS15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.975
PRKN
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.
    
0.973
RPS3
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.973
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.