Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTCD3Pentatricopeptide repeat domain 3. (689 aa)    
Predicted Functional Partners:
MRPS31
Mitochondrial ribosomal protein S31.
   
 0.986
MRPS22
28S ribosomal protein S22, mitochondrial.
   
 0.985
DAP3
Death associated protein 3.
   
 0.984
MRPS9
28S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
   
 0.983
MRPS14
Uncharacterized protein.
    
 0.981
MRPS23
MRP-S23 domain-containing protein.
   
 0.980
MRPS35
28S ribosomal protein S35, mitochondrial isoform 1.
   
 0.979
MRPS2
Mitochondrial ribosomal protein S2.
    
 0.974
MRPS18B
28S ribosomal protein S18b, mitochondrial; Belongs to the bacterial ribosomal protein bS18 family. Mitochondrion-specific ribosomal protein mS40 subfamily.
   
 0.973
MRPS27
Mitochondrial ribosomal protein S27.
   
 0.968
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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