STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR83Uncharacterized protein. (315 aa)    
Predicted Functional Partners:
SF3B4
Splicing factor 3B subunit 4.
    
 
 0.942
PRPF8
Pre-mRNA processing factor 8.
    
   0.911
GPATCH1
G-patch domain containing 1.
    
 
 0.881
LAMTOR3
Ragulator complex protein LAMTOR3 isoform 1.
   
 0.831
LAMTOR2
Robl_LC7 domain-containing protein.
   
 
  0.748
C3H7orf25
Chromosome 3 C7orf25 homolog.
 
 
    0.685
CCDC12
Coiled-coil domain containing 12.
    
 
 0.612
EGLN3
Egl nine homolog 3.
    
 
 0.578
CWF19L2
CWF19 like cell cycle control factor 2.
   
 
 0.567
KSR1
Kinase suppressor of ras 1.
    
 0.555
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.