STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM193BFAM193_C domain-containing protein. (822 aa)    
Predicted Functional Partners:
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1.
   
 0.713
EPRS1
Glutamyl-prolyl-tRNA synthetase.
      
 0.651
PPIL1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
     
 0.606
SLU7
Pre-mRNA-splicing factor SLU7.
   
 
  0.602
ALYREF
RRM domain-containing protein.
   
  0.585
NKAP
NF-kappa-B-activating protein.
   
  0.578
NKAPL
NFKB activating protein like.
    
  0.573
CDC40
Pre-mRNA-processing factor 17.
    
 0.570
SRRM1
Serine and arginine repetitive matrix 1.
    
  0.569
DHX38
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
   
 0.556
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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