Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CNTNAP2 | FMR1 | ENSMMUP00000020716 | ENSMMUP00000058618 | Contactin associated protein like 2. | Fragile X mental retardation 1 protein isoform ISO1. | 0.617 |
CNTNAP2 | NLGN3 | ENSMMUP00000020716 | ENSMMUP00000045329 | Contactin associated protein like 2. | Neuroligin-3; Cell surface protein involved in cell-cell-interactions via its interactions with neurexin family members. Plays a role in synapse function and synaptic signal transmission, and probably mediates its effects by recruiting and clustering other synaptic proteins. May promote the initial formation of synapses, but is not essential for this. May also play a role in glia-glia or glia-neuron interactions in the developing peripheral nervous system (By similarity). | 0.833 |
CNTNAP2 | NRXN1 | ENSMMUP00000020716 | ENSMMUP00000046829 | Contactin associated protein like 2. | Uncharacterized protein. | 0.438 |
CNTNAP2 | SHANK1 | ENSMMUP00000020716 | ENSMMUP00000012256 | Contactin associated protein like 2. | SH3 and multiple ankyrin repeat domains 1. | 0.579 |
CNTNAP2 | SHANK2 | ENSMMUP00000020716 | ENSMMUP00000061886 | Contactin associated protein like 2. | SH3 and multiple ankyrin repeat domains 2. | 0.620 |
CNTNAP2 | SHANK3 | ENSMMUP00000020716 | ENSMMUP00000007390 | Contactin associated protein like 2. | SH3 and multiple ankyrin repeat domains 3. | 0.795 |
DLG4 | FMR1 | ENSMMUP00000068361 | ENSMMUP00000058618 | Uncharacterized protein; Belongs to the MAGUK family. | Fragile X mental retardation 1 protein isoform ISO1. | 0.555 |
DLG4 | NLGN3 | ENSMMUP00000068361 | ENSMMUP00000045329 | Uncharacterized protein; Belongs to the MAGUK family. | Neuroligin-3; Cell surface protein involved in cell-cell-interactions via its interactions with neurexin family members. Plays a role in synapse function and synaptic signal transmission, and probably mediates its effects by recruiting and clustering other synaptic proteins. May promote the initial formation of synapses, but is not essential for this. May also play a role in glia-glia or glia-neuron interactions in the developing peripheral nervous system (By similarity). | 0.811 |
DLG4 | NRXN1 | ENSMMUP00000068361 | ENSMMUP00000046829 | Uncharacterized protein; Belongs to the MAGUK family. | Uncharacterized protein. | 0.763 |
DLG4 | NRXN2 | ENSMMUP00000068361 | ENSMMUP00000029746 | Uncharacterized protein; Belongs to the MAGUK family. | Neurexin 2. | 0.766 |
DLG4 | NRXN3 | ENSMMUP00000068361 | ENSMMUP00000018193 | Uncharacterized protein; Belongs to the MAGUK family. | Neurexin 3. | 0.607 |
DLG4 | SHANK1 | ENSMMUP00000068361 | ENSMMUP00000012256 | Uncharacterized protein; Belongs to the MAGUK family. | SH3 and multiple ankyrin repeat domains 1. | 0.834 |
DLG4 | SHANK2 | ENSMMUP00000068361 | ENSMMUP00000061886 | Uncharacterized protein; Belongs to the MAGUK family. | SH3 and multiple ankyrin repeat domains 2. | 0.814 |
DLG4 | SHANK3 | ENSMMUP00000068361 | ENSMMUP00000007390 | Uncharacterized protein; Belongs to the MAGUK family. | SH3 and multiple ankyrin repeat domains 3. | 0.821 |
FMR1 | CNTNAP2 | ENSMMUP00000058618 | ENSMMUP00000020716 | Fragile X mental retardation 1 protein isoform ISO1. | Contactin associated protein like 2. | 0.617 |
FMR1 | DLG4 | ENSMMUP00000058618 | ENSMMUP00000068361 | Fragile X mental retardation 1 protein isoform ISO1. | Uncharacterized protein; Belongs to the MAGUK family. | 0.555 |
FMR1 | NLGN3 | ENSMMUP00000058618 | ENSMMUP00000045329 | Fragile X mental retardation 1 protein isoform ISO1. | Neuroligin-3; Cell surface protein involved in cell-cell-interactions via its interactions with neurexin family members. Plays a role in synapse function and synaptic signal transmission, and probably mediates its effects by recruiting and clustering other synaptic proteins. May promote the initial formation of synapses, but is not essential for this. May also play a role in glia-glia or glia-neuron interactions in the developing peripheral nervous system (By similarity). | 0.784 |
FMR1 | NRXN1 | ENSMMUP00000058618 | ENSMMUP00000046829 | Fragile X mental retardation 1 protein isoform ISO1. | Uncharacterized protein. | 0.560 |
FMR1 | SHANK1 | ENSMMUP00000058618 | ENSMMUP00000012256 | Fragile X mental retardation 1 protein isoform ISO1. | SH3 and multiple ankyrin repeat domains 1. | 0.511 |
FMR1 | SHANK2 | ENSMMUP00000058618 | ENSMMUP00000061886 | Fragile X mental retardation 1 protein isoform ISO1. | SH3 and multiple ankyrin repeat domains 2. | 0.442 |
page 1 of 4