STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFAP54Cilia and flagella associated protein 54. (3096 aa)    
Predicted Functional Partners:
TMEM212
Transmembrane protein 212.
   
  
 0.887
SPEF2
Calponin-homology (CH) domain-containing protein.
   
 
 0.687
CCDC39
Coiled-coil domain containing 39.
      
 0.651
PRX
Periaxin.
    
 
 0.644
SFMBT1
Scm like with four mbt domains 1.
      
 0.611
TBX1
T-box transcription factor 1.
   
  
 0.595
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 
 0.575
ST6GALNAC6
Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6; Belongs to the glycosyltransferase 29 family.
   
    0.565
WDPCP
WD repeat containing planar cell polarity effector.
   
    0.503
RCL1
RNA 3'-terminal phosphate cyclase-like protein.
      
 0.491
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.