STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTCHD3Patched domain containing 3. (1040 aa)    
Predicted Functional Partners:
ANKMY2
Ankyrin repeat and MYND domain containing 2.
      
 0.780
LOC703060
WD_REPEATS_REGION domain-containing protein.
      
 0.688
IFT80
Intraflagellar transport protein 80 homolog isoform a.
      
 0.681
IFT57
Intraflagellar transport 57.
      
 0.640
IFT140
Intraflagellar transport 140.
      
 0.633
CNGA1
Cyclic nucleotide gated channel subunit alpha 1.
      
 0.538
IFT88
Intraflagellar transport 88.
      
 0.537
BSN
Bassoon presynaptic cytomatrix protein.
   
  
 0.503
WDR74
WD repeat-containing protein 74.
      
 0.495
TTC8
Tetratricopeptide repeat domain 8.
      
 0.439
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.