STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VCLVinculin. (1134 aa)    
Predicted Functional Partners:
PXN
Paxillin.
   
 0.999
TLN1
Talin 1.
   
 0.999
TLN2
Talin 2.
   
 0.998
ACTN1
Actinin alpha 1.
   
 0.995
ACTN4
Actinin alpha 4.
   
 0.989
CTNNA1
Uncharacterized protein.
   
0.987
CTNNA2
Catenin alpha 2.
   
0.982
CTNNA3
Catenin alpha-3.
   
0.980
ACTG1
Actin, cytoplasmic 2.
   
 0.951
SORBS3
Sorbin and SH3 domain containing 3.
   
 0.950
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.