Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDR2Cerebellar degeneration-related protein 2. (454 aa)    
Predicted Functional Partners:
CDR1
Cerebellar degeneration related protein 1.
      
 0.968
CDR2L
Cerebellar degeneration-related protein 2-like.
    
   0.902
KTN1
Kinectin 1.
    
   0.750
C5H4orf46
Chromosome 4 open reading frame 46.
    
   0.743
TCHP
Uncharacterized protein.
    
   0.717
CDT1
Chromatin licensing and DNA replication factor 1.
   
   0.669
TRBV14
T cell receptor beta variable 14.
      
 0.663
IGSF3
Immunoglobulin superfamily member 3.
    
   0.657
TRBV7-2
Ig-like domain-containing protein.
      
 0.602
SEC14L1
SEC14-like protein 1 isoform b.
   
  
 0.579
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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