STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPTFBromodomain PHD finger transcription factor. (3156 aa)    
Predicted Functional Partners:
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.932
H3-4
Histone H3; Belongs to the histone H3 family.
    
 
 0.927
SMARCA1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1.
   
 
 0.880
RSF1
Remodeling and spacing factor 1.
   
 
 0.828
NIPBL
Nipped-B protein.
   
  
 0.769
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.764
RBBP4
WD_REPEATS_REGION domain-containing protein.
    
 
 0.742
PRRC2C
Proline rich coiled-coil 2C.
   
  
 0.739
LOC106995979
Histone-binding protein RBBP4 isoform a.
    
 
 0.736
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 
 0.706
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.