STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNAB3Trafficking protein particle complex 1. (569 aa)    
Predicted Functional Partners:
KCNH3
Potassium voltage-gated channel subfamily H member 3.
    
 0.894
CACNB1
Calcium voltage-gated channel auxiliary subunit beta 1.
   
  
 0.855
OPCML
Opioid binding protein/cell adhesion molecule like.
   
  
 0.853
NTRK2
Tyrosine-protein kinase receptor.
   
 0.786
GABRA5
Gamma-aminobutyric acid type A receptor alpha5 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.772
SCN1A
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
   
 
 0.767
KCNC4
Potassium voltage-gated channel subfamily C member 4; Belongs to the potassium channel family.
   
 0.764
SYN2
Synapsin II.
   
  
 0.751
KCNA5
Potassium voltage-gated channel subfamily A member 5; Belongs to the potassium channel family.
   
 0.722
KCNG1
Potassium voltage-gated channel modifier subfamily G member 1; Belongs to the potassium channel family.
   
 0.701
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.