STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRPF18SFM domain-containing protein. (352 aa)    
Predicted Functional Partners:
SLU7
Pre-mRNA-splicing factor SLU7.
  
 0.991
SNRNP200
U5 small nuclear ribonucleoprotein 200 kDa helicase.
    
 0.986
CDC5L
Cell division cycle 5-like protein.
   
 
 0.977
BUD31
Protein BUD31 homolog.
    
 
 0.968
PRPF8
Pre-mRNA processing factor 8.
   
 0.961
CDC40
Pre-mRNA-processing factor 17.
   
 0.952
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component isoform a.
   
 0.913
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.912
DHX38
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
   
 0.909
CWC25
CWC25 spliceosome associated protein homolog.
    
 0.904
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.