STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAMP8Vesicle-associated membrane protein 8. (100 aa)    
Predicted Functional Partners:
STX17
Syntaxin-17; Belongs to the syntaxin family.
   
 0.999
SNAP29
Synaptosome associated protein 29.
   
 0.999
STX7
Syntaxin-7; Belongs to the syntaxin family.
   
 0.991
SNAP23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.984
VPS16
Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.
   
 
 0.982
VPS39
Uncharacterized protein.
    
 
 0.982
STX5
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.980
VTI1A
t-SNARE coiled-coil homology domain-containing protein.
   
 0.980
VPS33A
Vacuolar protein sorting-associated protein 33A; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.979
BET1
Bet1 golgi vesicular membrane trafficking protein.
    
 0.979
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.