HDHD5 protein (Macaca mulatta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

HDHD5

Cat eye syndrome critical region protein 5. (423 aa)

Predicted Functional Partners:

ADA2

0.653

ISY1

0.617

TCEANC2

0.558

UQCRC1

0.539

METTL17

0.513

CECR2

0.502

TMEM121B

0.498

PPM1K

0.449

COX11

0.448

ABHD11

0.448

Your Current Organism:

Macaca mulatta

NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABHD11	HDHD5	ENSMMUP00000019117	ENSMMUP00000037355	Abhydrolase domain containing 11.	Cat eye syndrome critical region protein 5.	0.448
ADA2	HDHD5	ENSMMUP00000003402	ENSMMUP00000037355	Adenosine deaminase 2.	Cat eye syndrome critical region protein 5.	0.653
CECR2	HDHD5	ENSMMUP00000008858	ENSMMUP00000037355	CECR2 histone acetyl-lysine reader.	Cat eye syndrome critical region protein 5.	0.502
COX11	HDHD5	ENSMMUP00000013827	ENSMMUP00000037355	Cytochrome c oxidase copper chaperone COX11.	Cat eye syndrome critical region protein 5.	0.448
COX11	METTL17	ENSMMUP00000013827	ENSMMUP00000004223	Cytochrome c oxidase copper chaperone COX11.	Methyltransferase like 17.	0.635
COX11	UQCRC1	ENSMMUP00000013827	ENSMMUP00000019293	Cytochrome c oxidase copper chaperone COX11.	Ubiquinol-cytochrome c reductase core protein 1.	0.585
HDHD5	ABHD11	ENSMMUP00000037355	ENSMMUP00000019117	Cat eye syndrome critical region protein 5.	Abhydrolase domain containing 11.	0.448
HDHD5	ADA2	ENSMMUP00000037355	ENSMMUP00000003402	Cat eye syndrome critical region protein 5.	Adenosine deaminase 2.	0.653
HDHD5	CECR2	ENSMMUP00000037355	ENSMMUP00000008858	Cat eye syndrome critical region protein 5.	CECR2 histone acetyl-lysine reader.	0.502
HDHD5	COX11	ENSMMUP00000037355	ENSMMUP00000013827	Cat eye syndrome critical region protein 5.	Cytochrome c oxidase copper chaperone COX11.	0.448
HDHD5	ISY1	ENSMMUP00000037355	ENSMMUP00000015213	Cat eye syndrome critical region protein 5.	Uncharacterized protein.	0.617
HDHD5	METTL17	ENSMMUP00000037355	ENSMMUP00000004223	Cat eye syndrome critical region protein 5.	Methyltransferase like 17.	0.513
HDHD5	PPM1K	ENSMMUP00000037355	ENSMMUP00000075257	Cat eye syndrome critical region protein 5.	Protein phosphatase, Mg2+/Mn2+ dependent 1K.	0.449
HDHD5	TCEANC2	ENSMMUP00000037355	ENSMMUP00000040126	Cat eye syndrome critical region protein 5.	Transcription elongation factor A N-terminal and central domain-containing protein 2.	0.558
HDHD5	TMEM121B	ENSMMUP00000037355	ENSMMUP00000029251	Cat eye syndrome critical region protein 5.	Transmembrane protein 121B.	0.498
HDHD5	UQCRC1	ENSMMUP00000037355	ENSMMUP00000019293	Cat eye syndrome critical region protein 5.	Ubiquinol-cytochrome c reductase core protein 1.	0.539
ISY1	HDHD5	ENSMMUP00000015213	ENSMMUP00000037355	Uncharacterized protein.	Cat eye syndrome critical region protein 5.	0.617
METTL17	COX11	ENSMMUP00000004223	ENSMMUP00000013827	Methyltransferase like 17.	Cytochrome c oxidase copper chaperone COX11.	0.635
METTL17	HDHD5	ENSMMUP00000004223	ENSMMUP00000037355	Methyltransferase like 17.	Cat eye syndrome critical region protein 5.	0.513
PPM1K	HDHD5	ENSMMUP00000075257	ENSMMUP00000037355	Protein phosphatase, Mg2+/Mn2+ dependent 1K.	Cat eye syndrome critical region protein 5.	0.449