STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTN3Reticulon. (968 aa)    
Predicted Functional Partners:
RTN4
Reticulon.
   
0.965
BACE1
Beta-secretase 1 isoform A preproprotein; Belongs to the peptidase A1 family.
   
 0.964
BACE2
Beta-secretase 2; Belongs to the peptidase A1 family.
   
 0.944
ATL3
Atlastin GTPase 3.
    
 
 0.707
OMG
Oligodendrocyte-myelin glycoprotein.
   
 0.678
ATL1
Atlastin-1 isoform a.
    
 
 0.674
LINGO1
Leucine rich repeat and Ig domain containing 1.
   
 0.669
SIL1
SIL1 nucleotide exchange factor.
   
  
 0.655
PEX3
Peroxisomal biogenesis factor 3.
      
 0.651
DVL3
Segment polarity protein dishevelled homolog DVL-3.
      
 0.651
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.