NUP107 protein (Macaca mulatta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NUP107

Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (925 aa)

Predicted Functional Partners:

NUP160

0.999

NUP85

0.999

NUP133

0.999

NUP37

0.999

SEC13

0.998

RANBP2

0.998

NUP43

0.997

NUP98

0.997

NUP93

0.996

NUP214

0.996

Your Current Organism:

Macaca mulatta

NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NUP107	NUP133	ENSMMUP00000039223	ENSMMUP00000062351	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nucleoporin 133.	0.999
NUP107	NUP160	ENSMMUP00000039223	ENSMMUP00000014247	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nucleoporin 160.	0.999
NUP107	NUP214	ENSMMUP00000039223	ENSMMUP00000078162	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nucleoporin 214.	0.996
NUP107	NUP37	ENSMMUP00000039223	ENSMMUP00000075443	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	WD_REPEATS_REGION domain-containing protein.	0.999
NUP107	NUP43	ENSMMUP00000039223	ENSMMUP00000012867	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nucleoporin 43.	0.997
NUP107	NUP85	ENSMMUP00000039223	ENSMMUP00000058994	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.999
NUP107	NUP93	ENSMMUP00000039223	ENSMMUP00000059917	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.	0.996
NUP107	NUP98	ENSMMUP00000039223	ENSMMUP00000057696	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nucleoporin 98.	0.997
NUP107	RANBP2	ENSMMUP00000039223	ENSMMUP00000045768	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	RAN binding protein 2.	0.998
NUP107	SEC13	ENSMMUP00000039223	ENSMMUP00000026199	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.	0.998
NUP133	NUP107	ENSMMUP00000062351	ENSMMUP00000039223	Nucleoporin 133.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.999
NUP133	NUP160	ENSMMUP00000062351	ENSMMUP00000014247	Nucleoporin 133.	Nucleoporin 160.	0.999
NUP133	NUP214	ENSMMUP00000062351	ENSMMUP00000078162	Nucleoporin 133.	Nucleoporin 214.	0.989
NUP133	NUP37	ENSMMUP00000062351	ENSMMUP00000075443	Nucleoporin 133.	WD_REPEATS_REGION domain-containing protein.	0.999
NUP133	NUP43	ENSMMUP00000062351	ENSMMUP00000012867	Nucleoporin 133.	Nucleoporin 43.	0.998
NUP133	NUP85	ENSMMUP00000062351	ENSMMUP00000058994	Nucleoporin 133.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.999
NUP133	NUP93	ENSMMUP00000062351	ENSMMUP00000059917	Nucleoporin 133.	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.	0.983
NUP133	NUP98	ENSMMUP00000062351	ENSMMUP00000057696	Nucleoporin 133.	Nucleoporin 98.	0.997
NUP133	RANBP2	ENSMMUP00000062351	ENSMMUP00000045768	Nucleoporin 133.	RAN binding protein 2.	0.998
NUP133	SEC13	ENSMMUP00000062351	ENSMMUP00000026199	Nucleoporin 133.	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.	0.999