STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTBP2Polypyrimidine tract-binding protein 2. (531 aa)    
Predicted Functional Partners:
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3 isoform a.
   
 0.799
SFPQ
Splicing factor, proline-and glutamine-rich.
   
 
 0.774
HNRNPH1
Heterogeneous nuclear ribonucleoprotein H1.
   
 0.772
HNRNPK
Heterogeneous nuclear ribonucleoprotein K isoform a.
   
 0.715
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L like.
   
0.688
ELAVL1
ELAV-like protein; Belongs to the RRM elav family.
   
 0.675
CSTF2T
Cleavage stimulation factor subunit 2 tau variant.
   
 0.671
CEP350
Centrosomal protein 350.
   
  
 0.670
HNRNPA1
Heterogeneous nuclear ribonucleoprotein A1 isoform b.
   
 0.670
HNRNPA1-2
Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed; Involved in the packaging of pre-mRNA into hnRNP particles, transport of poly(A) mRNA from the nucleus to the cytoplasm and may modulate splice site selection. May bind to specific miRNA hairpins (By similarity).
   
 0.665
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.