STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRRM1Serine and arginine repetitive matrix 1. (906 aa)    
Predicted Functional Partners:
UPF3A
UPF3A regulator of nonsense mediated mRNA decay.
    
 0.978
RBM25
RNA binding motif protein 25.
   
 0.956
UPF2
UPF2 regulator of nonsense mediated mRNA decay.
    
 
 0.942
UPF1
UPF1 RNA helicase and ATPase.
   
 
 0.938
SRRM2
Serine/arginine repetitive matrix 2.
   
 0.937
ALYREF
RRM domain-containing protein.
   
 0.923
TCERG1
Transcription elongation regulator 1.
   
 0.914
SRSF11
Serine and arginine rich splicing factor 11.
   
 0.912
SF3B1
SF3b1 domain-containing protein.
   
 
 0.911
RANBP2
RAN binding protein 2.
   
 0.911
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.