| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GPC3 | IGF2 | ENSMMUP00000045159 | ENSMMUP00000075297 | Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Insulin like growth factor 2. | 0.931 |
| GPC3 | IHH | ENSMMUP00000045159 | ENSMMUP00000001060 | Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | 0.955 |
| GPC3 | SHH | ENSMMUP00000045159 | ENSMMUP00000065431 | Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | 0.960 |
| GPC3 | WNT2 | ENSMMUP00000045159 | ENSMMUP00000062667 | Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | 0.924 |
| GPC3 | WNT2B | ENSMMUP00000045159 | ENSMMUP00000010202 | Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | 0.920 |
| GPC3 | WNT3 | ENSMMUP00000045159 | ENSMMUP00000027394 | Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | 0.933 |
| GPC3 | WNT3A | ENSMMUP00000045159 | ENSMMUP00000006513 | Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | 0.953 |
| GPC3 | WNT4 | ENSMMUP00000045159 | ENSMMUP00000068014 | Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | 0.920 |
| GPC3 | WNT5A | ENSMMUP00000045159 | ENSMMUP00000074193 | Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | 0.936 |
| GPC3 | WNT8A | ENSMMUP00000045159 | ENSMMUP00000030207 | Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | 0.918 |
| IGF2 | GPC3 | ENSMMUP00000075297 | ENSMMUP00000045159 | Insulin like growth factor 2. | Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.931 |
| IHH | GPC3 | ENSMMUP00000001060 | ENSMMUP00000045159 | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.955 |
| IHH | SHH | ENSMMUP00000001060 | ENSMMUP00000065431 | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | 0.936 |
| IHH | WNT4 | ENSMMUP00000001060 | ENSMMUP00000068014 | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | 0.436 |
| SHH | GPC3 | ENSMMUP00000065431 | ENSMMUP00000045159 | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.960 |
| SHH | IHH | ENSMMUP00000065431 | ENSMMUP00000001060 | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | 0.936 |
| SHH | WNT2 | ENSMMUP00000065431 | ENSMMUP00000062667 | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | 0.541 |
| SHH | WNT3A | ENSMMUP00000065431 | ENSMMUP00000006513 | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | 0.547 |
| SHH | WNT5A | ENSMMUP00000065431 | ENSMMUP00000074193 | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | 0.596 |
| WNT2 | GPC3 | ENSMMUP00000062667 | ENSMMUP00000045159 | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.924 |