UPF1 protein (Macaca mulatta) - STRING interaction network

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Predicted Interactions

gene neighborhood

gene fusions

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textmining

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Score

UPF1

UPF1 RNA helicase and ATPase. (1129 aa)

Predicted Functional Partners:

UPF3B

0.999

UPF2

0.999

UPF3A

0.998

SMG1

0.998

SMG6

0.992

CASC3

0.983

RBM8A

0.981

SMG5

0.979

SMG7

0.975

ALYREF

0.952

Your Current Organism:

Macaca mulatta

NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALYREF	CASC3	ENSMMUP00000042995	ENSMMUP00000047316	RRM domain-containing protein.	Btz domain-containing protein.	0.685
ALYREF	RBM8A	ENSMMUP00000042995	ENSMMUP00000077714	RRM domain-containing protein.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.942
ALYREF	UPF1	ENSMMUP00000042995	ENSMMUP00000043788	RRM domain-containing protein.	UPF1 RNA helicase and ATPase.	0.952
ALYREF	UPF2	ENSMMUP00000042995	ENSMMUP00000077764	RRM domain-containing protein.	UPF2 regulator of nonsense mediated mRNA decay.	0.507
ALYREF	UPF3A	ENSMMUP00000042995	ENSMMUP00000009769	RRM domain-containing protein.	UPF3A regulator of nonsense mediated mRNA decay.	0.975
ALYREF	UPF3B	ENSMMUP00000042995	ENSMMUP00000026624	RRM domain-containing protein.	Uncharacterized protein.	0.909
CASC3	ALYREF	ENSMMUP00000047316	ENSMMUP00000042995	Btz domain-containing protein.	RRM domain-containing protein.	0.685
CASC3	RBM8A	ENSMMUP00000047316	ENSMMUP00000077714	Btz domain-containing protein.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.999
CASC3	SMG1	ENSMMUP00000047316	ENSMMUP00000065979	Btz domain-containing protein.	SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.	0.698
CASC3	SMG5	ENSMMUP00000047316	ENSMMUP00000075161	Btz domain-containing protein.	SMG5 nonsense mediated mRNA decay factor.	0.773
CASC3	SMG6	ENSMMUP00000047316	ENSMMUP00000030488	Btz domain-containing protein.	Telomerase-binding protein EST1A isoform 1.	0.875
CASC3	SMG7	ENSMMUP00000047316	ENSMMUP00000037894	Btz domain-containing protein.	SMG7 nonsense mediated mRNA decay factor.	0.561
CASC3	UPF1	ENSMMUP00000047316	ENSMMUP00000043788	Btz domain-containing protein.	UPF1 RNA helicase and ATPase.	0.983
CASC3	UPF2	ENSMMUP00000047316	ENSMMUP00000077764	Btz domain-containing protein.	UPF2 regulator of nonsense mediated mRNA decay.	0.967
CASC3	UPF3A	ENSMMUP00000047316	ENSMMUP00000009769	Btz domain-containing protein.	UPF3A regulator of nonsense mediated mRNA decay.	0.982
CASC3	UPF3B	ENSMMUP00000047316	ENSMMUP00000026624	Btz domain-containing protein.	Uncharacterized protein.	0.995
RBM8A	ALYREF	ENSMMUP00000077714	ENSMMUP00000042995	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	RRM domain-containing protein.	0.942
RBM8A	CASC3	ENSMMUP00000077714	ENSMMUP00000047316	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	Btz domain-containing protein.	0.999
RBM8A	SMG1	ENSMMUP00000077714	ENSMMUP00000065979	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.	0.953
RBM8A	SMG5	ENSMMUP00000077714	ENSMMUP00000075161	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	SMG5 nonsense mediated mRNA decay factor.	0.736