STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TYW5tRNA-yW synthesizing protein 5. (331 aa)    
Predicted Functional Partners:
LCMT2
Leucine carboxyl methyltransferase 2.
 
    
 0.928
SLC38A7
Putative sodium-coupled neutral amino acid transporter 7.
      
 0.825
COPS7A
COP9 signalosome complex subunit 7a.
      
 0.780
JMJD4
Jumonji domain containing 4.
      
 0.749
JMJD8
Jumonji domain containing 8.
      
 0.728
TRMT12
tRNA methyltransferase 12 homolog.
 
    
 0.698
LOC703026
tRNA wybutosine-synthesizing protein 1 homolog.
      
 0.624
TYW3
tRNA wybutosine-synthesizing protein 3 homolog isoform 1.
      
 0.621
USP40
Ubiquitin specific peptidase 40; Belongs to the peptidase C19 family.
      
 0.585
JMJD6
Jumonji domain containing 6, arginine demethylase and lysine hydroxylase.
      
 0.573
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.