STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMARCAD1annotation not available (1026 aa)    
Predicted Functional Partners:
TRIM28
Tripartite motif containing 28.
   
 
 0.905
EXO1
Exonuclease 1.
   
 
 0.772
MSH2
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
   
 
 0.745
TRIM33
Tripartite motif containing 33.
   
 
 0.694
WRN
WRN RecQ like helicase.
   
 
 0.653
DNA2
DNA replication helicase/nuclease 2; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 
 0.652
BLM
BLM RecQ like helicase.
   
 
 0.640
TRIM24
Transcription intermediary factor 1-alpha isoform a.
   
 
 0.620
ZNF287
Zinc finger protein with KRAB and SCAN domains 13.
    
 
 0.618
ZNF878
Zinc finger protein 878.
    
 
 0.609
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.