STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGD4FYVE, RhoGEF and PH domain containing 4. (931 aa)    
Predicted Functional Partners:
CDC42
Cell division control protein 42 homolog isoform 1.
   
 0.658
PIGN
Phosphatidylinositol glycan anchor biosynthesis class N.
   
  
 0.609
SH3TC2
SH3 domain and tetratricopeptide repeats 2.
      
 0.553
UTP11
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
      
 0.501
LRSAM1
Leucine rich repeat and sterile alpha motif containing 1.
      
 0.498
EXOC6
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
      
 0.483
MTMR2
Myotubularin-related protein 2 isoform 1.
      
 0.478
GDAP1
Ganglioside-induced differentiation-associated protein 1; Belongs to the GST superfamily.
      
 0.477
SYBU
Syntabulin isoform a.
      
 0.470
DARS1
Aspartyl-tRNA synthetase, cytoplasmic.
   
  
 0.450
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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