STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDCCAG8Serologically defined colon cancer antigen 8. (837 aa)    
Predicted Functional Partners:
OFD1
OFD1 centriole and centriolar satellite protein.
    
 
 0.774
IQCB1
IQ calmodulin-binding motif-containing protein 1 isoform a.
   
 
 0.764
CAPN5
Calpain 5; Belongs to the peptidase C2 family.
   
 
 0.693
NPHP4
Nephrocystin 4.
    
 
 0.654
CEP290
Centrosomal protein 290.
      
 0.652
AHI1
Abelson helper integration site 1.
   
 0.649
CEP164
Centrosomal protein 164.
   
 0.646
IFT140
Intraflagellar transport 140.
      
 0.642
ADAMTS18
ADAM metallopeptidase with thrombospondin type 1 motif 18.
   
  
 0.634
RPGRIP1L
C2 domain-containing protein.
   
 
 0.632
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.