STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXC13Homeobox C13. (329 aa)    
Predicted Functional Partners:
FOXN1
Forkhead box N1.
   
 
 0.824
TYR
Tyrosinase.
   
 
 0.714
KRT35
Keratin 35; Belongs to the intermediate filament family.
   
  
 0.658
DSG4
Desmoglein 4; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
      
 0.634
LEF1
Lymphoid enhancer binding factor 1.
    
 
 0.626
KRT34
Keratin 34; Belongs to the intermediate filament family.
   
  
 0.618
KRT31
Keratin 31; Belongs to the intermediate filament family.
   
  
 0.598
KRT84
Keratin 84; Belongs to the intermediate filament family.
   
  
 0.595
PADI3
Peptidyl arginine deiminase 3.
   
  
 0.595
KRT85
Keratin 85; Belongs to the intermediate filament family.
   
  
 0.588
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.