STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFF3Trefoil factor 3. (130 aa)    
Predicted Functional Partners:
DNAH5
Dynein axonemal heavy chain 5.
      
 0.651
DNAH1
Dynein axonemal heavy chain 1.
      
 0.651
MUC2
Uncharacterized protein.
   
  
 0.633
FCGBP
Uncharacterized protein.
    
 
 0.592
SLC31A1
High affinity copper uptake protein 1.
      
 0.586
CST3
Cystatin-C; As an inhibitor of cysteine proteinases, this protein is thought to serve an important physiological role as a local regulator of this enzyme activity; Belongs to the cystatin family.
      
 0.546
CLU
Clusterin; Belongs to the clusterin family.
      
 0.546
ZNF185
Zinc finger protein 185 with LIM domain.
      
 0.544
BCAS1
Breast carcinoma amplified sequence 1.
      
 0.539
ATOH1
Atonal bHLH transcription factor 1.
      
 0.507
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.