Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEP152 | DDX18 | ENSMMUP00000063004 | ENSMMUP00000066362 | Centrosomal protein 152. | RNA helicase. | 0.977 |
CEP152 | EBNA1BP2 | ENSMMUP00000063004 | ENSMMUP00000068000 | Centrosomal protein 152. | EBNA1 binding protein 2. | 0.975 |
CEP152 | FTSJ3 | ENSMMUP00000063004 | ENSMMUP00000074711 | Centrosomal protein 152. | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.966 |
CEP152 | GTPBP4 | ENSMMUP00000063004 | ENSMMUP00000058354 | Centrosomal protein 152. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.969 |
CEP152 | NOC2L | ENSMMUP00000063004 | ENSMMUP00000040703 | Centrosomal protein 152. | NOC2 like nucleolar associated transcriptional repressor. | 0.976 |
CEP152 | NOC3L | ENSMMUP00000063004 | ENSMMUP00000002172 | Centrosomal protein 152. | Nucleolar complex protein 3 homolog. | 0.965 |
CEP152 | PES1 | ENSMMUP00000063004 | ENSMMUP00000023123 | Centrosomal protein 152. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family. | 0.990 |
CEP152 | RSL1D1 | ENSMMUP00000063004 | ENSMMUP00000048434 | Centrosomal protein 152. | Ribosomal L1 domain containing 1. | 0.967 |
CEP152 | WDR12 | ENSMMUP00000063004 | ENSMMUP00000044267 | Centrosomal protein 152. | Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.988 |
CEP152 | WDR74 | ENSMMUP00000063004 | ENSMMUP00000068997 | Centrosomal protein 152. | WD repeat-containing protein 74. | 0.975 |
DDX18 | CEP152 | ENSMMUP00000066362 | ENSMMUP00000063004 | RNA helicase. | Centrosomal protein 152. | 0.977 |
DDX18 | EBNA1BP2 | ENSMMUP00000066362 | ENSMMUP00000068000 | RNA helicase. | EBNA1 binding protein 2. | 0.975 |
DDX18 | FTSJ3 | ENSMMUP00000066362 | ENSMMUP00000074711 | RNA helicase. | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.980 |
DDX18 | GTPBP4 | ENSMMUP00000066362 | ENSMMUP00000058354 | RNA helicase. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.992 |
DDX18 | NOC2L | ENSMMUP00000066362 | ENSMMUP00000040703 | RNA helicase. | NOC2 like nucleolar associated transcriptional repressor. | 0.988 |
DDX18 | NOC3L | ENSMMUP00000066362 | ENSMMUP00000002172 | RNA helicase. | Nucleolar complex protein 3 homolog. | 0.963 |
DDX18 | PES1 | ENSMMUP00000066362 | ENSMMUP00000023123 | RNA helicase. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family. | 0.991 |
DDX18 | RSL1D1 | ENSMMUP00000066362 | ENSMMUP00000048434 | RNA helicase. | Ribosomal L1 domain containing 1. | 0.995 |
DDX18 | WDR12 | ENSMMUP00000066362 | ENSMMUP00000044267 | RNA helicase. | Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.989 |
DDX18 | WDR74 | ENSMMUP00000066362 | ENSMMUP00000068997 | RNA helicase. | WD repeat-containing protein 74. | 0.989 |
page 1 of 6