Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CHST11 | CHST12 | ENSMMUP00000022534 | ENSMMUP00000063758 | Carbohydrate sulfotransferase. | Carbohydrate sulfotransferase. | 0.914 |
CHST11 | CHST13 | ENSMMUP00000022534 | ENSMMUP00000039807 | Carbohydrate sulfotransferase. | Carbohydrate sulfotransferase. | 0.902 |
CHST11 | HS3ST1 | ENSMMUP00000022534 | ENSMMUP00000065452 | Carbohydrate sulfotransferase. | Sulfotransferase; Belongs to the sulfotransferase 1 family. | 0.600 |
CHST11 | HS3ST2 | ENSMMUP00000022534 | ENSMMUP00000078894 | Carbohydrate sulfotransferase. | Sulfotransferase; Belongs to the sulfotransferase 1 family. | 0.610 |
CHST11 | HS3ST3A1 | ENSMMUP00000022534 | ENSMMUP00000010554 | Carbohydrate sulfotransferase. | Sulfotransferase; Belongs to the sulfotransferase 1 family. | 0.610 |
CHST11 | HS3ST3B1 | ENSMMUP00000022534 | ENSMMUP00000078415 | Carbohydrate sulfotransferase. | Sulfotransferase; Belongs to the sulfotransferase 1 family. | 0.689 |
CHST11 | HS3ST4 | ENSMMUP00000022534 | ENSMMUP00000068253 | Carbohydrate sulfotransferase. | Sulfotransferase; Belongs to the sulfotransferase 1 family. | 0.684 |
CHST11 | HS6ST3 | ENSMMUP00000022534 | ENSMMUP00000007705 | Carbohydrate sulfotransferase. | Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. | 0.617 |
CHST11 | NDST2 | ENSMMUP00000022534 | ENSMMUP00000030257 | Carbohydrate sulfotransferase. | Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2. | 0.649 |
CHST11 | NDST4 | ENSMMUP00000022534 | ENSMMUP00000003853 | Carbohydrate sulfotransferase. | N-deacetylase and N-sulfotransferase 4. | 0.643 |
CHST12 | CHST11 | ENSMMUP00000063758 | ENSMMUP00000022534 | Carbohydrate sulfotransferase. | Carbohydrate sulfotransferase. | 0.914 |
CHST12 | CHST13 | ENSMMUP00000063758 | ENSMMUP00000039807 | Carbohydrate sulfotransferase. | Carbohydrate sulfotransferase. | 0.900 |
CHST12 | HS3ST1 | ENSMMUP00000063758 | ENSMMUP00000065452 | Carbohydrate sulfotransferase. | Sulfotransferase; Belongs to the sulfotransferase 1 family. | 0.687 |
CHST12 | HS3ST2 | ENSMMUP00000063758 | ENSMMUP00000078894 | Carbohydrate sulfotransferase. | Sulfotransferase; Belongs to the sulfotransferase 1 family. | 0.688 |
CHST12 | HS3ST3A1 | ENSMMUP00000063758 | ENSMMUP00000010554 | Carbohydrate sulfotransferase. | Sulfotransferase; Belongs to the sulfotransferase 1 family. | 0.688 |
CHST12 | HS3ST3B1 | ENSMMUP00000063758 | ENSMMUP00000078415 | Carbohydrate sulfotransferase. | Sulfotransferase; Belongs to the sulfotransferase 1 family. | 0.783 |
CHST12 | HS3ST4 | ENSMMUP00000063758 | ENSMMUP00000068253 | Carbohydrate sulfotransferase. | Sulfotransferase; Belongs to the sulfotransferase 1 family. | 0.780 |
CHST12 | HS6ST3 | ENSMMUP00000063758 | ENSMMUP00000007705 | Carbohydrate sulfotransferase. | Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. | 0.690 |
CHST12 | NDST2 | ENSMMUP00000063758 | ENSMMUP00000030257 | Carbohydrate sulfotransferase. | Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2. | 0.780 |
CHST12 | NDST4 | ENSMMUP00000063758 | ENSMMUP00000003853 | Carbohydrate sulfotransferase. | N-deacetylase and N-sulfotransferase 4. | 0.780 |
page 1 of 3