STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100428894Putative DUX4 protein. (425 aa)    
Predicted Functional Partners:
SMCHD1
Structural maintenance of chromosomes flexible hinge domain-containing protein 1.
      
 0.842
FRG1
FSHD region gene 1.
      
 0.828
FRG1-2
Uncharacterized protein.
      
 0.828
PLAC9
Uncharacterized protein.
      
 0.748
PLAC9-2
Placenta associated 9.
      
 0.748
SP6
Sp6 transcription factor.
    
 0.697
TIMM22
Translocase of inner mitochondrial membrane 22.
    
 0.689
TAF11
Transcription initiation factor TFIID subunit 11.
    
 
 0.632
ZFP37
ZFP37 zinc finger protein.
    
 0.605
ASH1L
Putative histone-lysine N-methyltransferase ASH1L.
   
 0.604
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.