STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUS3tRNA pseudouridine synthase 3. (480 aa)    
Predicted Functional Partners:
PUS10
Pseudouridine synthase 10.
   
  
 0.873
MRPL17
39S ribosomal protein L17, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
  
  
 0.787
WDR4
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
 
 0.787
TRUB1
TruB pseudouridine synthase family member 1.
   
 0.785
PUS7
Pseudouridine synthase 7.
   
 
 0.776
RPUSD4
RNA pseudouridine synthase D4.
 
  
 0.773
PUS7L
Pseudouridine synthase 7 like.
   
 
 0.757
POLR2C
RNA polymerase II subunit C.
  
  
 0.725
POLR1C
DNA-directed RNA polymerases I and III subunit RPAC1.
  
  
 0.724
LBR
Lamin-B receptor.
   
  
 0.715
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.