STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTX1Orthodenticle homeobox 1. (354 aa)    
Predicted Functional Partners:
NR2E1
Nuclear receptor subfamily 2 group E member 1.
   
 
 0.796
NEUROD2
Neurogenic differentiation factor.
   
  
 0.741
FEZF2
FEZ family zinc finger 2.
    
 
 0.607
LHX2
LIM/homeobox protein Lhx2.
    
 
 0.579
FOXG1
Forkhead box G1.
   
  
 0.575
WDR70
WD repeat-containing protein 70.
      
 0.559
CDK5RAP2
CDK5 regulatory subunit associated protein 2.
    
 
 0.545
NKX2-8
NK2 homeobox 8.
   
  
 0.540
CUX1
Homeobox protein cut-like.
      
 0.536
TBR1
T-box brain transcription factor 1.
   
 
 0.534
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.