STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF4Stromal cell derived factor 4. (484 aa)    
Predicted Functional Partners:
PVALB
Parvalbumin; Belongs to the parvalbumin family.
   
  
 0.914
CALB1
Calbindin 1.
      
 0.912
CALML6
Calmodulin like 6.
   
  
 0.699
S100B
Protein S100; Belongs to the S-100 family.
      
 0.698
CALML3
Calmodulin-related protein NB-1; Belongs to the calmodulin family.
      
 0.682
CALML5
Calmodulin-like protein 5.
      
 0.658
LOC717686
Uncharacterized protein; Belongs to the calmodulin family.
      
 0.658
CALM3
Calmodulin 3; Belongs to the calmodulin family.
   
  
 0.649
CALM2
Uncharacterized protein; Belongs to the calmodulin family.
      
 0.612
SST
Somatostatin preproprotein.
   
  
 0.603
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.