PRORP protein (Macaca mulatta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PRORP

Mitochondrial ribonuclease P protein 3. (581 aa)

Predicted Functional Partners:

TRMT10C

0.970

HSD17B10

0.968

POP5

0.799

FDFT1

0.719

SHPK

0.626

RPP30

0.612

KIAA0319

0.608

NDUFAF6

0.603

PACRG

0.594

POP4

0.590

Your Current Organism:

Macaca mulatta

NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FDFT1	PRORP	ENSMMUP00000061600	ENSMMUP00000069940	Uncharacterized protein.	Mitochondrial ribonuclease P protein 3.	0.719
HSD17B10	PRORP	ENSMMUP00000041047	ENSMMUP00000069940	3-hydroxyacyl-CoA dehydrogenase type-2 isoform 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Mitochondrial ribonuclease P protein 3.	0.968
HSD17B10	TRMT10C	ENSMMUP00000041047	ENSMMUP00000023380	3-hydroxyacyl-CoA dehydrogenase type-2 isoform 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	tRNA methyltransferase 10C, mitochondrial RNase P subunit.	0.975
KIAA0319	PRORP	ENSMMUP00000025442	ENSMMUP00000069940	KIAA0319.	Mitochondrial ribonuclease P protein 3.	0.608
NDUFAF6	PRORP	ENSMMUP00000032045	ENSMMUP00000069940	NADH:ubiquinone oxidoreductase complex assembly factor 6.	Mitochondrial ribonuclease P protein 3.	0.603
PACRG	PRORP	ENSMMUP00000026863	ENSMMUP00000069940	Parkin coregulated.	Mitochondrial ribonuclease P protein 3.	0.594
POP4	POP5	ENSMMUP00000022936	ENSMMUP00000063189	POP4 homolog, ribonuclease P/MRP subunit.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.	0.998
POP4	PRORP	ENSMMUP00000022936	ENSMMUP00000069940	POP4 homolog, ribonuclease P/MRP subunit.	Mitochondrial ribonuclease P protein 3.	0.590
POP4	RPP30	ENSMMUP00000022936	ENSMMUP00000035772	POP4 homolog, ribonuclease P/MRP subunit.	Ribonuclease P/MRP subunit p30.	0.999
POP4	TRMT10C	ENSMMUP00000022936	ENSMMUP00000023380	POP4 homolog, ribonuclease P/MRP subunit.	tRNA methyltransferase 10C, mitochondrial RNase P subunit.	0.429
POP5	POP4	ENSMMUP00000063189	ENSMMUP00000022936	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.	POP4 homolog, ribonuclease P/MRP subunit.	0.998
POP5	PRORP	ENSMMUP00000063189	ENSMMUP00000069940	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.	Mitochondrial ribonuclease P protein 3.	0.799
POP5	RPP30	ENSMMUP00000063189	ENSMMUP00000035772	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.	Ribonuclease P/MRP subunit p30.	0.999
PRORP	FDFT1	ENSMMUP00000069940	ENSMMUP00000061600	Mitochondrial ribonuclease P protein 3.	Uncharacterized protein.	0.719
PRORP	HSD17B10	ENSMMUP00000069940	ENSMMUP00000041047	Mitochondrial ribonuclease P protein 3.	3-hydroxyacyl-CoA dehydrogenase type-2 isoform 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.968
PRORP	KIAA0319	ENSMMUP00000069940	ENSMMUP00000025442	Mitochondrial ribonuclease P protein 3.	KIAA0319.	0.608
PRORP	NDUFAF6	ENSMMUP00000069940	ENSMMUP00000032045	Mitochondrial ribonuclease P protein 3.	NADH:ubiquinone oxidoreductase complex assembly factor 6.	0.603
PRORP	PACRG	ENSMMUP00000069940	ENSMMUP00000026863	Mitochondrial ribonuclease P protein 3.	Parkin coregulated.	0.594
PRORP	POP4	ENSMMUP00000069940	ENSMMUP00000022936	Mitochondrial ribonuclease P protein 3.	POP4 homolog, ribonuclease P/MRP subunit.	0.590
PRORP	POP5	ENSMMUP00000069940	ENSMMUP00000063189	Mitochondrial ribonuclease P protein 3.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.	0.799