STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC709052KRAB-related domain-containing protein. (188 aa)    
Predicted Functional Partners:
LOC106995824
KRAB-related domain-containing protein.
   
 
 
0.901
LOC708657
KRAB-related domain-containing protein.
   
 
 
0.901
MAGEA9
MAGE domain-containing protein.
   
 
 0.754
MAGEA10
MAGE family member A10.
   
 
 0.626
UXT
Ubiquitously expressed prefoldin like chaperone.
      
 0.614
PASD1
PAS domain containing repressor 1.
   
 
 0.603
LHX4
LIM homeobox 4.
    
 
 0.549
HIF1A
Hypoxia-inducible factor 1-alpha isoform 1.
    
   0.511
RAB3IP
RAB3A interacting protein.
    
 
 0.494
SS18
Protein SSXT isoform 1.
      
 0.433
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.