Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDX42 | PHF5A | ENSMMUP00000051942 | ENSMMUP00000071261 | ATP-dependent RNA helicase DDX42. | PHD finger-like domain-containing protein 5A. | 0.989 |
DDX42 | SF3A1 | ENSMMUP00000051942 | ENSMMUP00000007333 | ATP-dependent RNA helicase DDX42. | Splicing factor 3A subunit 1 isoform 1. | 0.722 |
DDX42 | SF3A2 | ENSMMUP00000051942 | ENSMMUP00000077354 | ATP-dependent RNA helicase DDX42. | Splicing factor 3a subunit 2. | 0.947 |
DDX42 | SF3B1 | ENSMMUP00000051942 | ENSMMUP00000029521 | ATP-dependent RNA helicase DDX42. | SF3b1 domain-containing protein. | 0.998 |
DDX42 | SF3B2 | ENSMMUP00000051942 | ENSMMUP00000015408 | ATP-dependent RNA helicase DDX42. | Splicing factor 3B subunit 2. | 0.985 |
DDX42 | SF3B3 | ENSMMUP00000051942 | ENSMMUP00000023419 | ATP-dependent RNA helicase DDX42. | Spliceosome-associated protein 130. | 0.995 |
DDX42 | SF3B4 | ENSMMUP00000051942 | ENSMMUP00000009515 | ATP-dependent RNA helicase DDX42. | Splicing factor 3B subunit 4. | 0.986 |
DDX42 | SF3B6 | ENSMMUP00000051942 | ENSMMUP00000058948 | ATP-dependent RNA helicase DDX42. | Pre-mRNA branch site protein p14. | 0.976 |
DDX42 | SNRPA1 | ENSMMUP00000051942 | ENSMMUP00000063067 | ATP-dependent RNA helicase DDX42. | LRRcap domain-containing protein. | 0.523 |
DDX42 | SNRPG | ENSMMUP00000051942 | ENSMMUP00000070982 | ATP-dependent RNA helicase DDX42. | Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. | 0.692 |
PHF5A | DDX42 | ENSMMUP00000071261 | ENSMMUP00000051942 | PHD finger-like domain-containing protein 5A. | ATP-dependent RNA helicase DDX42. | 0.989 |
PHF5A | SF3A1 | ENSMMUP00000071261 | ENSMMUP00000007333 | PHD finger-like domain-containing protein 5A. | Splicing factor 3A subunit 1 isoform 1. | 0.980 |
PHF5A | SF3A2 | ENSMMUP00000071261 | ENSMMUP00000077354 | PHD finger-like domain-containing protein 5A. | Splicing factor 3a subunit 2. | 0.993 |
PHF5A | SF3B1 | ENSMMUP00000071261 | ENSMMUP00000029521 | PHD finger-like domain-containing protein 5A. | SF3b1 domain-containing protein. | 0.999 |
PHF5A | SF3B2 | ENSMMUP00000071261 | ENSMMUP00000015408 | PHD finger-like domain-containing protein 5A. | Splicing factor 3B subunit 2. | 0.999 |
PHF5A | SF3B3 | ENSMMUP00000071261 | ENSMMUP00000023419 | PHD finger-like domain-containing protein 5A. | Spliceosome-associated protein 130. | 0.999 |
PHF5A | SF3B4 | ENSMMUP00000071261 | ENSMMUP00000009515 | PHD finger-like domain-containing protein 5A. | Splicing factor 3B subunit 4. | 0.998 |
PHF5A | SF3B6 | ENSMMUP00000071261 | ENSMMUP00000058948 | PHD finger-like domain-containing protein 5A. | Pre-mRNA branch site protein p14. | 0.999 |
PHF5A | SNRPA1 | ENSMMUP00000071261 | ENSMMUP00000063067 | PHD finger-like domain-containing protein 5A. | LRRcap domain-containing protein. | 0.982 |
PHF5A | SNRPG | ENSMMUP00000071261 | ENSMMUP00000070982 | PHD finger-like domain-containing protein 5A. | Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. | 0.990 |
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