G3BP2 protein (Macaca mulatta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G3BP2

Ras GTPase-activating protein-binding protein 2 isoform a. (482 aa)

Predicted Functional Partners:

CAPRIN1

0.963

USP10

0.913

G3BP1

0.817

TIA1

0.768

NUFIP2

0.708

TIAL1

0.679

ATXN2L

0.675

PABPC1

0.674

DDX6

0.653

UBAP2L

0.649

Your Current Organism:

Macaca mulatta

NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATXN2L	DDX6	ENSMMUP00000075796	ENSMMUP00000068224	Ataxin 2 like.	Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	0.835
ATXN2L	G3BP1	ENSMMUP00000075796	ENSMMUP00000019286	Ataxin 2 like.	G3BP stress granule assembly factor 1.	0.639
ATXN2L	G3BP2	ENSMMUP00000075796	ENSMMUP00000072073	Ataxin 2 like.	Ras GTPase-activating protein-binding protein 2 isoform a.	0.675
ATXN2L	NUFIP2	ENSMMUP00000075796	ENSMMUP00000016889	Ataxin 2 like.	Nuclear fragile X mental retardation-interacting protein 2.	0.620
ATXN2L	PABPC1	ENSMMUP00000075796	ENSMMUP00000015180	Ataxin 2 like.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.600
CAPRIN1	DDX6	ENSMMUP00000028504	ENSMMUP00000068224	Cell cycle associated protein 1.	Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	0.531
CAPRIN1	G3BP1	ENSMMUP00000028504	ENSMMUP00000019286	Cell cycle associated protein 1.	G3BP stress granule assembly factor 1.	0.991
CAPRIN1	G3BP2	ENSMMUP00000028504	ENSMMUP00000072073	Cell cycle associated protein 1.	Ras GTPase-activating protein-binding protein 2 isoform a.	0.963
CAPRIN1	NUFIP2	ENSMMUP00000028504	ENSMMUP00000016889	Cell cycle associated protein 1.	Nuclear fragile X mental retardation-interacting protein 2.	0.592
CAPRIN1	PABPC1	ENSMMUP00000028504	ENSMMUP00000015180	Cell cycle associated protein 1.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.511
CAPRIN1	TIA1	ENSMMUP00000028504	ENSMMUP00000001495	Cell cycle associated protein 1.	Nucleolysin TIA-1 isoform p40 isoform 2.	0.730
CAPRIN1	TIAL1	ENSMMUP00000028504	ENSMMUP00000055530	Cell cycle associated protein 1.	TIA1 cytotoxic granule associated RNA binding protein like 1.	0.488
CAPRIN1	UBAP2L	ENSMMUP00000028504	ENSMMUP00000073947	Cell cycle associated protein 1.	Ubiquitin associated protein 2 like.	0.635
CAPRIN1	USP10	ENSMMUP00000028504	ENSMMUP00000060296	Cell cycle associated protein 1.	Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.	0.672
DDX6	ATXN2L	ENSMMUP00000068224	ENSMMUP00000075796	Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	Ataxin 2 like.	0.835
DDX6	CAPRIN1	ENSMMUP00000068224	ENSMMUP00000028504	Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	Cell cycle associated protein 1.	0.531
DDX6	G3BP1	ENSMMUP00000068224	ENSMMUP00000019286	Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	G3BP stress granule assembly factor 1.	0.688
DDX6	G3BP2	ENSMMUP00000068224	ENSMMUP00000072073	Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	Ras GTPase-activating protein-binding protein 2 isoform a.	0.653
DDX6	NUFIP2	ENSMMUP00000068224	ENSMMUP00000016889	Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	Nuclear fragile X mental retardation-interacting protein 2.	0.630
DDX6	PABPC1	ENSMMUP00000068224	ENSMMUP00000015180	Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.758