STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRBV27T cell receptor beta variable 27. (148 aa)    
Predicted Functional Partners:
EPHB6
Ephrin type-B receptor 6.
    
 0.554
PRSS58
Serine protease 58; Belongs to the peptidase S1 family.
    
 0.525
TRAV29DV5
T cell receptor alpha variable 29/delta variable 5 (gene/pseudogene).
  
 
  0.500
TRAV5
T cell receptor alpha variable 5.
  
 
 0.462
HLA-DRA
Mamu class II histocompatibility antigen, DR alpha chain; Belongs to the MHC class II family.
    
  0.430
IGHM
Immunoglobulin heavy constant mu.
  
 
  0.429
IGHA2
Immunoglobulin heavy constant alpha 2 (A2m marker).
  
 
  0.426
ENSMMUP00000077609
Ig-like domain-containing protein.
  
   
 0.425
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.