STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REG3ARegenerating family member 3 alpha. (175 aa)    
Predicted Functional Partners:
LBP
Lipopolysaccharide binding protein.
   
  
 0.686
SAA2
Amyloid protein A; Major acute phase reactant. Apolipoprotein of the HDL complex.
      
 0.651
SLC36A1
Solute carrier family 36 member 1.
      
 0.589
IL22
Interleukin-22.
      
 0.544
SAA1
Serum amyloid A protein; Major acute phase reactant. Apolipoprotein of the HDL complex.
   
  
 0.517
SLC15A1
Solute carrier family 15 member 1.
   
 
 0.489
ATP5MC1
ATP synthase lipid-binding protein, mitochondrial; Belongs to the ATPase C chain family.
     
 0.482
CNDP1
Carnosine dipeptidase 1.
    
 
 0.454
P2RY6
Pyrimidinergic receptor P2Y6.
      
 0.442
CPEB4
Cytoplasmic polyadenylation element-binding protein 4.
      
 0.442
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.