STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTRF1Peptide chain release factor 1, mitochondrial. (445 aa)    
Predicted Functional Partners:
N6AMT1
N-6 adenine-specific DNA methyltransferase 1.
  
 
 0.855
HEMK1
HemK methyltransferase family member 1.
  
 
 0.816
YARS1
Tyrosine--tRNA ligase.
  
  
 0.797
MRPS11
28S ribosomal protein S11, mitochondrial isoform a; Belongs to the universal ribosomal protein uS11 family.
 
 
 0.789
EPRS1
Glutamyl-prolyl-tRNA synthetase.
  
  
 0.787
GFM2
Ribosome-releasing factor 2, mitochondrial; Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Acts in collaboration with MRRF. GTP hydrolysis follows the ribosome disassembly and probably occurs on the ribosome large subunit. Not involved in the GTP-dependent ribosomal translocation step during translation elongation; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
 
 
 0.753
MRPL9
Mitochondrial ribosomal protein L9.
  
 
 0.749
MRRF
Mitochondrial ribosome recycling factor.
  
 
 0.746
TK1
Thymidine kinase.
  
  
 0.746
MRPL17
39S ribosomal protein L17, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.739
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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