STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SWT1SWT1 RNA endoribonuclease homolog. (903 aa)    
Predicted Functional Partners:
PHTF1
Putative homeodomain transcription factor 1.
   
 
 0.717
FMR1NB
FMR1 neighbor.
      
 0.703
SMG5
SMG5 nonsense mediated mRNA decay factor.
    
 
 0.698
TRIML2
Tripartite motif family like 2.
    
 
 0.694
TRMT1L
TRMT1-like protein isoform 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
   
  
 0.656
DMRTB1
DMRT like family B with proline rich C-terminal 1.
      
 0.617
BEND2
BEN domain containing 2.
      
 0.603
ZMYM1
Zinc finger MYM-type containing 1.
   
  
 0.594
TCEA1
Transcription elongation factor A protein 1 isoform 1.
   
  
 0.594
PAGE4
PAGE family member 4.
      
 0.585
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.