STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BARHL1BarH like homeobox 1. (327 aa)    
Predicted Functional Partners:
ATOH1
Atonal bHLH transcription factor 1.
   
  
 0.706
PTF1A
Pancreas associated transcription factor 1a.
   
  
 0.650
SKOR2
SKI family transcriptional corepressor 2.
      
 0.590
LHX5
LIM homeobox 5.
   
 
 0.588
WLS
Protein wntless homolog isoform 2.
      
 0.580
IRX3
Iroquois homeobox 3.
   
 
 0.503
LMX1A
LIM homeobox transcription factor 1 alpha.
    
 
 0.494
GDF7
Growth differentiation factor 7.
      
 0.481
CHCHD10
Coiled-coil-helix-coiled-coil-helix domain containing 10.
      
 0.472
RSPH1
Radial spoke head component 1.
      
 0.472
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.