STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NONONon-POU domain containing octamer binding. (471 aa)    
Predicted Functional Partners:
SFPQ
Splicing factor proline and glutamine rich.
   
 
0.995
PSPC1
Paraspeckle component 1.
    
 
0.944
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.711
BOLL
Boule homolog, RNA binding protein.
    
 
 0.689
RBM14
RNA binding motif protein 14.
   
 
 0.662
ILF3
Interleukin enhancer binding factor 3.
   
 
 0.617
CGAS
Cyclic GMP-AMP synthase.
      
 0.614
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.608
PTBP1
Polypyrimidine tract binding protein 1.
   
 
0.582
FUS
FUS RNA binding protein.
   
 
 0.577
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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