STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERCC1ERCC excision repair 1, endonuclease non-catalytic subunit. (323 aa)    
Predicted Functional Partners:
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit.
   
 0.999
FANCM
FA complementation group M.
   
 0.999
XPA
XPA, DNA damage recognition and repair factor.
    
 0.981
SLX4
SLX4 structure-specific endonuclease subunit.
   
 0.981
MUS81
MUS81 structure-specific endonuclease subunit.
   
 0.963
FANCL
FA complementation group L.
    
 0.956
FANCG
FA complementation group G.
    
 0.949
FANCB
FA complementation group B.
    
 0.945
MSH2
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
    
 0.912
NARS1
Asparaginyl-tRNA synthetase.
   
 0.908
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.