STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTCHD3Patched domain containing 3. (769 aa)    
Predicted Functional Partners:
ANKMY2
Ankyrin repeat and MYND domain containing 2.
      
 0.660
IFT122
Intraflagellar transport 122.
      
 0.602
IFT80
Intraflagellar transport 80.
      
 0.598
IFT57
Intraflagellar transport 57.
      
 0.575
IFT140
Intraflagellar transport 140.
      
 0.571
CNGA1
Cyclic nucleotide gated channel subunit alpha 1.
      
 0.502
IFT88
Intraflagellar transport 88.
      
 0.501
WDR74
WD repeat domain 74.
      
 0.465
BSN
Bassoon presynaptic cytomatrix protein.
   
  
 0.402
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.