STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX6SRY-box transcription factor 6. (829 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
   
 0.726
SOX5
SRY-box transcription factor 5.
  
 
 
0.684
JUP
Junction plakoglobin.
   
 0.662
KLF1
Kruppel like factor 1.
    
 
 0.648
SOX9
SRY-box transcription factor 9.
    
0.626
LHX6
LIM homeobox 6.
    
 
 0.605
GATA1
GATA binding protein 1.
    
 
 0.600
BCL11A
BAF chromatin remodeling complex subunit BCL11A.
    
 
 0.592
CREB5
Cyclic AMP-responsive element-binding protein 5; Binds to the cAMP response element and activates transcription.
  
   
 0.567
COL2A1
Collagen type II alpha 1 chain.
      
 0.563
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.