Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATOH7 | CRX | ENSMNEP00000003677 | ENSMNEP00000016300 | Atonal bHLH transcription factor 7. | Cone-rod homeobox. | 0.504 |
ATOH7 | GDF11 | ENSMNEP00000003677 | ENSMNEP00000018846 | Atonal bHLH transcription factor 7. | Growth differentiation factor 11. | 0.489 |
ATOH7 | ISL1 | ENSMNEP00000003677 | ENSMNEP00000036303 | Atonal bHLH transcription factor 7. | ISL LIM homeobox 1. | 0.560 |
ATOH7 | ONECUT1 | ENSMNEP00000003677 | ENSMNEP00000000871 | Atonal bHLH transcription factor 7. | One cut domain family member. | 0.556 |
ATOH7 | POU4F2 | ENSMNEP00000003677 | ENSMNEP00000025777 | Atonal bHLH transcription factor 7. | POU domain protein. | 0.575 |
ATOH7 | TCF12 | ENSMNEP00000003677 | ENSMNEP00000022290 | Atonal bHLH transcription factor 7. | Transcription factor 12. | 0.612 |
ATOH7 | TCF3 | ENSMNEP00000003677 | ENSMNEP00000012562 | Atonal bHLH transcription factor 7. | Transcription factor 3. | 0.612 |
ATOH7 | TCF4 | ENSMNEP00000003677 | ENSMNEP00000039589 | Atonal bHLH transcription factor 7. | Transcription factor 4. | 0.612 |
ATOH7 | VSX1 | ENSMNEP00000003677 | ENSMNEP00000003009 | Atonal bHLH transcription factor 7. | Visual system homeobox 1. | 0.568 |
ATOH7 | VSX2 | ENSMNEP00000003677 | ENSMNEP00000036217 | Atonal bHLH transcription factor 7. | Visual system homeobox 2. | 0.609 |
CRX | ATOH7 | ENSMNEP00000016300 | ENSMNEP00000003677 | Cone-rod homeobox. | Atonal bHLH transcription factor 7. | 0.504 |
GDF11 | ATOH7 | ENSMNEP00000018846 | ENSMNEP00000003677 | Growth differentiation factor 11. | Atonal bHLH transcription factor 7. | 0.489 |
ISL1 | ATOH7 | ENSMNEP00000036303 | ENSMNEP00000003677 | ISL LIM homeobox 1. | Atonal bHLH transcription factor 7. | 0.560 |
ISL1 | POU4F2 | ENSMNEP00000036303 | ENSMNEP00000025777 | ISL LIM homeobox 1. | POU domain protein. | 0.531 |
ISL1 | VSX1 | ENSMNEP00000036303 | ENSMNEP00000003009 | ISL LIM homeobox 1. | Visual system homeobox 1. | 0.449 |
ONECUT1 | ATOH7 | ENSMNEP00000000871 | ENSMNEP00000003677 | One cut domain family member. | Atonal bHLH transcription factor 7. | 0.556 |
ONECUT1 | POU4F2 | ENSMNEP00000000871 | ENSMNEP00000025777 | One cut domain family member. | POU domain protein. | 0.502 |
ONECUT1 | VSX1 | ENSMNEP00000000871 | ENSMNEP00000003009 | One cut domain family member. | Visual system homeobox 1. | 0.556 |
POU4F2 | ATOH7 | ENSMNEP00000025777 | ENSMNEP00000003677 | POU domain protein. | Atonal bHLH transcription factor 7. | 0.575 |
POU4F2 | ISL1 | ENSMNEP00000025777 | ENSMNEP00000036303 | POU domain protein. | ISL LIM homeobox 1. | 0.531 |
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