C21orf62 protein (Macaca nemestrina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

C21orf62

Chromosome 21 open reading frame 62. (266 aa)

Predicted Functional Partners:

PTCD2

0.577

FRRS1L

0.577

ZNF106

0.569

OTUD5

0.569

SIX5

0.560

FRMD8

0.556

SCAF11

0.556

SPAG5

0.556

DHX29

0.555

PROM2

0.555

Your Current Organism:

Macaca nemestrina

NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C21orf62	DHX29	ENSMNEP00000004012	ENSMNEP00000006270	Chromosome 21 open reading frame 62.	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	0.555
C21orf62	FRMD8	ENSMNEP00000004012	ENSMNEP00000005659	Chromosome 21 open reading frame 62.	FERM domain containing 8.	0.556
C21orf62	FRRS1L	ENSMNEP00000004012	ENSMNEP00000025196	Chromosome 21 open reading frame 62.	Ferric chelate reductase 1 like.	0.577
C21orf62	OTUD5	ENSMNEP00000004012	ENSMNEP00000038938	Chromosome 21 open reading frame 62.	OTU deubiquitinase 5.	0.569
C21orf62	PROM2	ENSMNEP00000004012	ENSMNEP00000006645	Chromosome 21 open reading frame 62.	Prominin 2.	0.555
C21orf62	PTCD2	ENSMNEP00000004012	ENSMNEP00000001679	Chromosome 21 open reading frame 62.	Pentatricopeptide repeat domain 2.	0.577
C21orf62	SCAF11	ENSMNEP00000004012	ENSMNEP00000007942	Chromosome 21 open reading frame 62.	SR-related CTD associated factor 11.	0.556
C21orf62	SIX5	ENSMNEP00000004012	ENSMNEP00000016563	Chromosome 21 open reading frame 62.	SIX homeobox 5.	0.560
C21orf62	SPAG5	ENSMNEP00000004012	ENSMNEP00000037497	Chromosome 21 open reading frame 62.	Sperm associated antigen 5.	0.556
C21orf62	ZNF106	ENSMNEP00000004012	ENSMNEP00000038408	Chromosome 21 open reading frame 62.	Zinc finger protein 106.	0.569
DHX29	C21orf62	ENSMNEP00000006270	ENSMNEP00000004012	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Chromosome 21 open reading frame 62.	0.555
DHX29	FRRS1L	ENSMNEP00000006270	ENSMNEP00000025196	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ferric chelate reductase 1 like.	0.584
DHX29	OTUD5	ENSMNEP00000006270	ENSMNEP00000038938	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	OTU deubiquitinase 5.	0.558
DHX29	PTCD2	ENSMNEP00000006270	ENSMNEP00000001679	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Pentatricopeptide repeat domain 2.	0.555
DHX29	SCAF11	ENSMNEP00000006270	ENSMNEP00000007942	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	SR-related CTD associated factor 11.	0.444
DHX29	SIX5	ENSMNEP00000006270	ENSMNEP00000016563	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	SIX homeobox 5.	0.503
DHX29	SPAG5	ENSMNEP00000006270	ENSMNEP00000037497	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Sperm associated antigen 5.	0.482
DHX29	ZNF106	ENSMNEP00000006270	ENSMNEP00000038408	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Zinc finger protein 106.	0.580
FRMD8	C21orf62	ENSMNEP00000005659	ENSMNEP00000004012	FERM domain containing 8.	Chromosome 21 open reading frame 62.	0.556
FRMD8	FRRS1L	ENSMNEP00000005659	ENSMNEP00000025196	FERM domain containing 8.	Ferric chelate reductase 1 like.	0.556